I have/will update this post as I expanded the fanplot package.
I managed to catch David Spiegelhalter’s Tails You Win on BBC iplayer last week. I missed it the first time round, only for my parents on my last visit home to tell me about a Statistician jumping out of a plane on TV. It was a great watch. Towards the end I spotted some fan charts used by the Bank of England to illustrate uncertainty in their forecasts, similar to this one:
Split Normal (Two-Piece) Normal Distribution.
The Bank of England produce fan charts of forecasts for CPI and GDP in their quarterly Inflation Reports. They also provide data, in the form of mean, uncertainty and a skewness parameters of a split-normal distribution that underlie their fan charts (The Bank of England predominately refer to the equivalent, re-parametrised, two-piece normal distribution). The probability density of the split-normal distribution is given by Julio (2007) as
where represents the mean parameter, and the two standard deviations and can be derived given the overall uncertainty parameter, and skewness parameters, , as;
As no split normal distribution existed in R, I added routines for a density, distribution and quantile function, plus a random generator, to a new version (2.1) of the fanplot package. I used the formula in Julio (2007) to code each of the three functions, and checked the results against those from the fan chart MATLAB code.
Fan Chart Plots for CPI.
Once I had the
qsplitnorm function working properly, producing the fan chart plot in R was pretty straight-forward. I added two data objects to the fanplot package to help readers reproduce my plots below. The first,
cpi, is a time series object with past values of CPI index. The second,
boe, is a data frame with historical details on the split normal parameters for CPI inflation between Q1 2004 to Q4 2013 forecasts by the Bank of England.
> library("fanplot") > head(boe) time0 time mean uncertainty skew 1 2004 2004.00 1.34 0.2249 0 2 2004 2004.25 1.60 0.3149 0 3 2004 2004.50 1.60 0.3824 0 4 2004 2004.75 1.71 0.4274 0 5 2004 2005.00 1.77 0.4499 0 6 2004 2005.25 1.68 0.4761 0
The first column
time0 refers to the base year of forecast, the second,
time indexes future projections, whilst the remaining three columns provide values for the corresponding projected mean (), uncertainty () and skew () parameters:
Users can replicate past Bank of England fan charts for a particular period after creating a matrix object that contains values on the split-normal quantile function for a set of user defined probabilities. For example, in the code below, a subset of the Bank of England future parameters of CPI published in Q1 2013 are first selected. Then a vector of probabilities related to the percentiles, that we ultimately would like to plot different shaded fans for, are created. Finally, in a
for loop the
qsplitnorm function, calculates the values for which the time-specific (
i) split-normal distribution will be less than or equal to the probabilities of
# select relevant data y0 <- 2013 boe0 <- subset(boe, time0==y0) k <- nrow(boe0) # guess work to set percentiles the BOE are plotting p <- seq(0.05, 0.95, 0.05) p <- c(0.01, p, 0.99) # quantiles of split-normal distribution for each probability # (row) at each future time point (column) cpival <- matrix(NA, nrow = length(p), ncol = k) for (i in 1:k) cpival[, i] <- qsplitnorm(p, mean = boe0$mean[i], sd = boe0$uncertainty[i], skew = boe0$skew[i])
The new object
cpival contains the values evaluated from the
qsplitnorm function in 6 rows and 13 columns, where rows represent the probabilities used in the calculation
p and columns represent successive time periods.
cpival can then used to add a fan chart to the active R graphic device. In the code below, the area of the plot is set up when plotting the past CPI data, contained in the time series object
xlim arguments are set to ensure space on the right hand side of the plotting area for the fan. Following the Bank of England style for plotting fan charts, the background for future values is set to a gray colour, y-axis are plotted on the right hand side, a horizontal line are added for the CPI target and a vertical line for the two-year ahead point.
# past data plot(cpi, type = "l", col = "tomato", lwd = 2, xlim = c(y0 - 5, y0 + 3), ylim = c(-2, 7), xaxt = "n", yaxt = "n", ylab="") # background rect(y0 - 0.25, par("usr") - 1, y0 + 3, par("usr") + 1, border = "gray90", col = "gray90") # add fan fan(data = cpival, data.type = "values", probs = p, start = y0, frequency = 4, anchor = cpi[time(cpi) == y0 - 0.25], fan.col = colorRampPalette(c("tomato", "gray90")), ln = NULL, rlab = NULL) # boe aesthetics axis(2, at = -2:7, las = 2, tcl = 0.5, labels = FALSE) axis(4, at = -2:7, las = 2, tcl = 0.5) axis(1, at = 2008:2016, tcl = 0.5) axis(1, at = seq(2008, 2016, 0.25), labels = FALSE, tcl = 0.2) abline(h = 2) #boe cpi target abline(v = y0 + 1.75, lty = 2) #2 year line
The fan chart itself is outputted from the
fan function, where arguments are set to ensure a close resemblance of the R plot to that produced by the Bank of England. The first three arguments in the
fan function called in the above code, provide the
cpival data to plotted, indicate that the data are a set of calculated values (as opposed to simulations) and provide the probabilities that correspond to each row of
cpival object. The next two arguments define the start time and frequency of the data. These operate in a similar fashion to those used when defining time series in R with the
ts function. The
anchor argument is set to the value of CPI before the start of the fan chart. This allows a join between the value of the Q1 2013 observation and the fan chart. The
fan.col argument is set to a colour palette for shades between
gray90. The final two arguments are set to
NULL to suppress the plotting of contour lines at the boundary of each shaded fan and their labels, as per the Bank of England style.
Default Fan Chart Plot.
By default, the
fan function treats objects passed to the
data argument as simulations from sequential distributions, rather than user-created values corresponding probabilities provided in the
probs argument (as above). An alternative plot below, based on simulated data and default style settings in the
fan function produces a fan chart with a greater array of coloured fans with labels and contour lines alongside selected percentiles of the future distribution. To illustrate we can simulate 10,000 values from the future split-normal distribution parameters from Q1 2013 in the
boe0 data frame using the
#simulate future values cpisim <- matrix(NA, nrow = 10000, ncol = k) for (i in 1:k) cpisim[, i] <- rsplitnorm(n=10000, mean = boe0$mean[i], sd = boe0$uncertainty[i], skew = boe0$skew[i])
The fan chart based on the simulations in
cpisim can then be added to the plot;
# truncate cpi series cpi0 <- ts(cpi[time(cpi)<2013], start=start(cpi), frequency=frequency(cpi) ) # past data plot(cpi0, type = "l", lwd = 2, xlim = c(y0 - 5, y0 + 3.25), ylim = c(-2, 7)) # add fan fan(data = cpisim, start = y0, frequency = 4)
fan function calculates the values of 100 equally spaced percentiles of each future distribution when the default
data.type = "simulations" is set. This allows 50 fans to be plotted from the
heat.colours colour palate, providing a finer level of shading in the representation of future distributions. In addition, lines and labels are provided along each decile. The fan chart does not connect to the last observation as
anchor = NULL by default.